STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO66662.1Glucose-6-phosphate isomerase. (206 aa)    
Predicted Functional Partners:
SHO66660.1
Shikimate 5-dehydrogenase.
 
     0.905
SHO66658.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
 
     0.836
SHO66657.1
Transcriptional regulator, RpiR family.
 
  
  0.813
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
  0.774
SHO66661.1
2-keto-3-deoxy-phosphogluconate aldolase.
 
  
  0.774
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.774
SHO61828.1
Nucleotidyl transferase.
    
  0.751
SHO62307.1
Nucleotidyl transferase.
    
  0.751
SHO66663.1
Ribose transport system substrate-binding protein.
 
     0.746
SHO64587.1
Sugar phosphate isomerase/epimerase.
  
    0.723
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.