STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO66764.1Glycine/D-amino acid oxidase. (378 aa)    
Predicted Functional Partners:
SHO64354.1
Sarcosine oxidase subunit alpha.
 0.995
SHO67220.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
 0.992
SHO66754.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
  
  0.982
SHO64356.1
Sarcosine oxidase subunit delta.
 
 0.901
SHO60056.1
Aminomethyltransferase.
 
 
 0.893
SHO64351.1
Sarcosine oxidase subunit gamma.
 
  0.841
SHO59947.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.830
SHO64360.1
Sarcosine oxidase subunit beta.
  
  
 
0.797
SHO66935.1
5-aminolevulinate synthase.
    
 0.739
SHO60043.1
Glycine dehydrogenase subunit 2.
   
 
  0.730
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.