STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO66815.1Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-). (263 aa)    
Predicted Functional Partners:
SHO66816.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
  0.999
SHO66884.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.986
SHO66272.1
General L-amino acid transport system permease protein.
 0.966
SHO66817.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
  0.936
SHO67705.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 
  0.931
SHO66271.1
General L-amino acid transport system permease protein.
 
 
 0.920
SHO60476.1
Cystine transport system permease protein.
 
  0.916
SHO62759.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.909
SHO66102.1
Polar amino acid transport system permease protein.
 
  0.904
SHO64623.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.892
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.