STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO67546.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (393 aa)    
Predicted Functional Partners:
SHO67545.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SHO67547.1
Urea transport system ATP-binding protein.
 
 0.999
SHO67544.1
Urea transport system substrate-binding protein.
 
 
 0.998
SHO67548.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
 0.998
SHO66708.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
SHO67666.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 0.942
SHO66458.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.941
SHO67664.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 
 0.930
SHO66705.1
Branched-chain amino acid transport system ATP-binding protein.
 
  0.906
SHO65950.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.890
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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