STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426625_00245Unannotated protein. (208 aa)    
Predicted Functional Partners:
GCA_000426625_00246
Unannotated protein.
 
  
 0.900
GCA_000426625_03361
Unannotated protein.
     
 0.716
GCA_000426625_01734
Unannotated protein.
    
  0.661
GCA_000426625_02918
Unannotated protein.
     
 0.644
GCA_000426625_02165
Unannotated protein.
    
 0.516
GCA_000426625_02945
Unannotated protein.
    
  0.508
GCA_000426625_00247
Unannotated protein.
       0.499
GCA_000426625_01528
Unannotated protein.
    
  0.499
GCA_000426625_02506
Unannotated protein.
    
  0.468
GCA_000426625_00244
Unannotated protein.
  
    0.451
Your Current Organism:
Psychrilyobacter atlanticus
NCBI taxonomy Id: 1123032
Other names: P. atlanticus DSM 19335, Psychrilyobacter atlanticus DSM 19335
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.