STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426625_00494Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_000426625_02031
Unannotated protein.
  
 0.646
GCA_000426625_00493
Unannotated protein.
       0.608
GCA_000426625_00860
Unannotated protein.
    
  0.573
GCA_000426625_01323
Unannotated protein.
    
  0.573
GCA_000426625_00540
Unannotated protein.
 
     0.569
GCA_000426625_01662
Unannotated protein.
  
     0.564
GCA_000426625_01947
Unannotated protein.
  
    0.558
GCA_000426625_00539
Unannotated protein.
 
     0.521
GCA_000426625_00815
Unannotated protein.
  
 
 0.496
GCA_000426625_00495
Unannotated protein.
  
    0.467
Your Current Organism:
Psychrilyobacter atlanticus
NCBI taxonomy Id: 1123032
Other names: P. atlanticus DSM 19335, Psychrilyobacter atlanticus DSM 19335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.