STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426625_02187Unannotated protein. (473 aa)    
Predicted Functional Partners:
GCA_000426625_01900
Unannotated protein.
 0.944
GCA_000426625_00555
Unannotated protein.
  
 0.897
GCA_000426625_02586
Unannotated protein.
  
  
 0.874
GCA_000426625_02186
Unannotated protein.
 
     0.862
GCA_000426625_01896
Unannotated protein.
 
  
 0.768
GCA_000426625_00121
Unannotated protein.
 
   
 0.756
GCA_000426625_02379
Unannotated protein.
 
   
 0.753
GCA_000426625_02237
Unannotated protein.
  
  
 0.752
GCA_000426625_01901
Unannotated protein.
  
 
 0.723
GCA_000426625_03097
Unannotated protein.
  
 
 0.712
Your Current Organism:
Psychrilyobacter atlanticus
NCBI taxonomy Id: 1123032
Other names: P. atlanticus DSM 19335, Psychrilyobacter atlanticus DSM 19335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.