STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426625_03159Unannotated protein. (532 aa)    
Predicted Functional Partners:
GCA_000426625_00017
Unannotated protein.
   
 0.817
GCA_000426625_00248
Unannotated protein.
   
 0.816
GCA_000426625_00016
Unannotated protein.
   
  0.814
GCA_000426625_00273
Unannotated protein.
   
  0.814
GCA_000426625_00026
Unannotated protein.
   
  0.812
GCA_000426625_00019
Unannotated protein.
  
 
   0.740
GCA_000426625_00028
Unannotated protein.
   
 
 0.709
GCA_000426625_00711
Unannotated protein.
   
   0.707
GCA_000426625_01798
Unannotated protein.
   
   0.701
GCA_000426625_00023
Unannotated protein.
   
   0.700
Your Current Organism:
Psychrilyobacter atlanticus
NCBI taxonomy Id: 1123032
Other names: P. atlanticus DSM 19335, Psychrilyobacter atlanticus DSM 19335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.