STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000685805_00650Unannotated protein; Belongs to the UPF0176 family. (340 aa)    
Predicted Functional Partners:
rluC
Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
      0.825
GCA_000685805_02078
Unannotated protein.
 
     0.468
mrcA
Unannotated protein.
       0.435
rluA
Unannotated protein.
 
      0.402
Your Current Organism:
Psychrobacter phenylpyruvicus
NCBI taxonomy Id: 1123034
Other names: P. phenylpyruvicus DSM 7000 = NBRC 102152, Psychrobacter phenylpyruvicus DSM 7000, Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152, Psychrobacter phenylpyruvicus NBRC 102152, Psychrobacter phenylpyruvicus NBRC 102152 = DSM 7000
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