STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425345_00582Unannotated protein. (147 aa)    
Predicted Functional Partners:
GCA_000425345_00584
Unannotated protein.
 
  
 0.940
GCA_000425345_00583
Unannotated protein.
 
  
 0.930
GCA_000425345_00480
Unannotated protein.
 
  
 0.792
GCA_000425345_02210
Unannotated protein.
  
     0.543
GCA_000425345_02573
Unannotated protein.
  
   
 0.490
GCA_000425345_00585
Unannotated protein.
       0.480
GCA_000425345_00581
Unannotated protein.
       0.470
GCA_000425345_00535
Unannotated protein.
  
     0.460
GCA_000425345_00276
Unannotated protein.
  
     0.455
GCA_000425345_03769
Unannotated protein.
  
     0.450
Your Current Organism:
Rheinheimera baltica
NCBI taxonomy Id: 1123053
Other names: R. baltica DSM 14885, Rheinheimera baltica DSM 14885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.