STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382165_02789Unannotated protein. (364 aa)    
Predicted Functional Partners:
GCA_000382165_02788
Unannotated protein.
 
  
 0.914
GCA_000382165_03506
Unannotated protein.
  
     0.530
GCA_000382165_02807
Unannotated protein.
 
  
 0.512
GCA_000382165_02507
Unannotated protein.
    
 0.511
GCA_000382165_01433
Unannotated protein.
    
 0.503
GCA_000382165_03410
Unannotated protein.
  
  
 0.476
GCA_000382165_01914
Unannotated protein.
 
    0.469
GCA_000382165_01929
Unannotated protein.
 
  
 0.457
GCA_000382165_02765
Unannotated protein.
 
    0.456
GCA_000382165_02787
Unannotated protein.
       0.452
Your Current Organism:
Rheinheimera perlucida
NCBI taxonomy Id: 1123054
Other names: R. perlucida DSM 18276, Rheinheimera perlucida DSM 18276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.