STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382165_03023Unannotated protein. (83 aa)    
Predicted Functional Partners:
GCA_000382165_03024
Unannotated protein.
       0.785
GCA_000382165_03022
Unannotated protein.
       0.764
GCA_000382165_00414
Unannotated protein.
  
    0.722
GCA_000382165_01268
Unannotated protein.
  
    0.692
GCA_000382165_02493
Unannotated protein.
   
    0.664
GCA_000382165_02608
Unannotated protein.
   
    0.664
GCA_000382165_01642
Unannotated protein.
   
    0.659
GCA_000382165_03025
Unannotated protein.
       0.543
GCA_000382165_00351
Unannotated protein.
   
    0.501
GCA_000382165_00496
Unannotated protein.
  
    0.460
Your Current Organism:
Rheinheimera perlucida
NCBI taxonomy Id: 1123054
Other names: R. perlucida DSM 18276, Rheinheimera perlucida DSM 18276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.