STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382165_03528Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000382165_03529
Unannotated protein.
 
 0.990
GCA_000382165_02013
Unannotated protein.
    
 0.963
GCA_000382165_03239
Unannotated protein.
 
 0.961
GCA_000382165_03617
Unannotated protein.
 
 0.961
GCA_000382165_00134
Unannotated protein.
  
 0.844
GCA_000382165_03322
Unannotated protein.
  
 0.844
GCA_000382165_00674
Unannotated protein.
  
 
 0.838
GCA_000382165_03097
Unannotated protein.
  
 
 0.838
GCA_000382165_02653
Unannotated protein.
  
 0.837
GCA_000382165_02738
Unannotated protein.
   
 
  0.761
Your Current Organism:
Rheinheimera perlucida
NCBI taxonomy Id: 1123054
Other names: R. perlucida DSM 18276, Rheinheimera perlucida DSM 18276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.