STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711985_01573Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000711985_01609
Unannotated protein.
 
   
 0.933
GCA_000711985_03489
Unannotated protein.
 
   
 0.933
GCA_000711985_01612
Unannotated protein.
 
   
 0.880
GCA_000711985_00915
Unannotated protein.
  
 0.832
GCA_000711985_03207
Unannotated protein.
 
  
 0.825
GCA_000711985_01759
Unannotated protein.
  
 0.823
GCA_000711985_03683
Unannotated protein.
  
 0.823
GCA_000711985_00707
Unannotated protein.
 
  
 0.822
GCA_000711985_01610
Unannotated protein.
    
 0.792
GCA_000711985_01818
Unannotated protein.
    
 0.792
Your Current Organism:
Pararheinheimera texasensis
NCBI taxonomy Id: 1123055
Other names: P. texasensis DSM 17496, Pararheinheimera texasensis DSM 17496, Rheinheimera texasensis DSM 17496
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.