STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711985_02188Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_000711985_01942
Unannotated protein.
 
  
 0.568
GCA_000711985_02186
Unannotated protein.
       0.567
GCA_000711985_02187
Unannotated protein.
       0.562
GCA_000711985_02189
Unannotated protein.
       0.548
GCA_000711985_02190
Unannotated protein.
       0.494
GCA_000711985_02191
Unannotated protein.
       0.427
GCA_000711985_00721
Unannotated protein.
  
  
 0.414
GCA_000711985_02185
Unannotated protein.
       0.402
GCA_000711985_01738
Unannotated protein.
 
  
 0.401
Your Current Organism:
Pararheinheimera texasensis
NCBI taxonomy Id: 1123055
Other names: P. texasensis DSM 17496, Pararheinheimera texasensis DSM 17496, Rheinheimera texasensis DSM 17496
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.