STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711985_03433Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000711985_03434
Unannotated protein.
 
  
 0.991
GCA_000711985_01881
Unannotated protein.
 
 
 0.982
GCA_000711985_03435
Unannotated protein.
 
  
 0.974
GCA_000711985_02505
Unannotated protein.
 
 
 0.961
GCA_000711985_03075
Unannotated protein.
     
 0.956
GCA_000711985_03436
Unannotated protein.
  
  
 0.956
GCA_000711985_03432
Unannotated protein.
  
  
 0.923
GCA_000711985_02598
Unannotated protein.
    
 0.897
GCA_000711985_03431
Unannotated protein.
  
  
 0.871
GCA_000711985_03154
Unannotated protein.
  
    0.809
Your Current Organism:
Pararheinheimera texasensis
NCBI taxonomy Id: 1123055
Other names: P. texasensis DSM 17496, Pararheinheimera texasensis DSM 17496, Rheinheimera texasensis DSM 17496
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.