STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711985_03478Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_000711985_03484
Unannotated protein.
  
  
 0.723
GCA_000711985_03282
Unannotated protein.
    
   0.679
GCA_000711985_03479
Unannotated protein.
       0.601
GCA_000711985_01890
Unannotated protein.
    
   0.575
GCA_000711985_03480
Unannotated protein.
       0.530
GCA_000711985_03561
Unannotated protein.
  
  
 0.507
GCA_000711985_03477
Unannotated protein.
       0.505
GCA_000711985_03590
Unannotated protein.
   
    0.483
GCA_000711985_01741
Unannotated protein.
  
  
 0.470
GCA_000711985_03892
Unannotated protein.
  
  
 0.426
Your Current Organism:
Pararheinheimera texasensis
NCBI taxonomy Id: 1123055
Other names: P. texasensis DSM 17496, Pararheinheimera texasensis DSM 17496, Rheinheimera texasensis DSM 17496
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.