STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374405_01304Unannotated protein. (125 aa)    
Predicted Functional Partners:
GCA_000374405_00169
Unannotated protein.
 
 0.999
GCA_000374405_01975
Unannotated protein.
 
 0.999
GCA_000374405_01393
Unannotated protein.
  
 
 0.980
GCA_000374405_01199
Unannotated protein.
 
  
 0.974
GCA_000374405_01875
Unannotated protein.
 
  
 0.973
GCA_000374405_01456
Unannotated protein.
   
 0.934
GCA_000374405_00184
Unannotated protein.
   
 0.932
GCA_000374405_00049
Unannotated protein.
   
 
 0.926
GCA_000374405_01942
Unannotated protein.
   
 
 0.919
GCA_000374405_00695
Unannotated protein.
   
 0.911
Your Current Organism:
Riemerella columbina
NCBI taxonomy Id: 1123058
Other names: R. columbina DSM 16469, Riemerella columbina DSM 16469, Riemerella columbina LMG 11607
Server load: low (28%) [HD]