STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374405_02263Unannotated protein. (503 aa)    
Predicted Functional Partners:
GCA_000374405_01083
Unannotated protein.
  
 0.962
GCA_000374405_02020
Unannotated protein.
  
 
 0.896
GCA_000374405_00809
Unannotated protein.
    
 0.886
GCA_000374405_01975
Unannotated protein.
   
 0.870
GCA_000374405_01738
Unannotated protein.
  
 
 0.590
GCA_000374405_00412
Unannotated protein.
     
 0.577
GCA_000374405_00098
Unannotated protein.
  
   
 0.572
GCA_000374405_00114
Unannotated protein.
    
 0.551
GCA_000374405_02262
Unannotated protein.
       0.541
GCA_000374405_02358
Unannotated protein.
   
 0.540
Your Current Organism:
Riemerella columbina
NCBI taxonomy Id: 1123058
Other names: R. columbina DSM 16469, Riemerella columbina DSM 16469, Riemerella columbina LMG 11607
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.