STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000365025_00006Unannotated protein. (199 aa)    
Predicted Functional Partners:
GCA_000365025_01482
Unannotated protein.
   
 
 0.932
GCA_000365025_00564
Unannotated protein.
 
 
 0.927
GCA_000365025_02640
Unannotated protein.
   
 
 0.777
GCA_000365025_00156
Unannotated protein.
  
   0.713
GCA_000365025_01992
Unannotated protein.
  
 
 0.699
GCA_000365025_00312
Unannotated protein.
   
 
 0.630
GCA_000365025_01089
Unannotated protein.
  
 
 0.625
GCA_000365025_02180
Unannotated protein.
 
  
 0.605
GCA_000365025_00198
Unannotated protein.
  
 
 0.601
GCA_000365025_00566
Unannotated protein.
  
  
 0.574
Your Current Organism:
Robiginitomaculum antarcticum
NCBI taxonomy Id: 1123059
Other names: R. antarcticum DSM 21748, Robiginitomaculum antarcticum DSM 21748
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.