STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000365025_00149Unannotated protein. (467 aa)    
Predicted Functional Partners:
GCA_000365025_00795
Unannotated protein.
   
 
 0.946
GCA_000365025_01952
Unannotated protein.
   
 0.799
GCA_000365025_00711
Unannotated protein.
  
 0.757
GCA_000365025_00324
Unannotated protein.
  
 
 0.727
GCA_000365025_01903
Unannotated protein.
  
 
 0.727
GCA_000365025_02548
Unannotated protein.
  
 
 0.715
GCA_000365025_01185
Unannotated protein.
  
 
 0.658
GCA_000365025_00397
Unannotated protein.
    
  0.626
GCA_000365025_00919
Unannotated protein.
    
  0.626
GCA_000365025_01656
Unannotated protein.
  
 
 0.626
Your Current Organism:
Robiginitomaculum antarcticum
NCBI taxonomy Id: 1123059
Other names: R. antarcticum DSM 21748, Robiginitomaculum antarcticum DSM 21748
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.