STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000365025_01428Unannotated protein. (426 aa)    
Predicted Functional Partners:
GCA_000365025_01822
Unannotated protein.
   
 0.859
GCA_000365025_02324
Unannotated protein.
  
  
  0.813
GCA_000365025_01819
Unannotated protein.
    
 0.808
GCA_000365025_00203
Unannotated protein.
  
 
  0.610
GCA_000365025_00447
Unannotated protein.
     
 0.571
GCA_000365025_00319
Unannotated protein.
  
 
 0.529
GCA_000365025_00994
Unannotated protein.
   
 
 0.529
GCA_000365025_00865
Unannotated protein.
    
 0.522
GCA_000365025_01388
Unannotated protein.
     
 0.516
GCA_000365025_00473
Unannotated protein.
  
  
 0.515
Your Current Organism:
Robiginitomaculum antarcticum
NCBI taxonomy Id: 1123059
Other names: R. antarcticum DSM 21748, Robiginitomaculum antarcticum DSM 21748
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.