STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000365025_01668Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000365025_01669
Unannotated protein.
 
 0.998
GCA_000365025_01670
Unannotated protein.
 
 0.994
GCA_000365025_02081
Unannotated protein.
     
 0.760
GCA_000365025_00812
Unannotated protein.
   
 
 0.757
GCA_000365025_00987
Unannotated protein.
     
 0.755
GCA_000365025_01839
Unannotated protein.
     
 0.735
GCA_000365025_01671
Unannotated protein.
     
 0.721
GCA_000365025_02371
Unannotated protein.
     
 0.628
GCA_000365025_02547
Unannotated protein.
     
 0.628
GCA_000365025_01992
Unannotated protein.
 
   
 0.596
Your Current Organism:
Robiginitomaculum antarcticum
NCBI taxonomy Id: 1123059
Other names: R. antarcticum DSM 21748, Robiginitomaculum antarcticum DSM 21748
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.