STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711725_04980Unannotated protein. (276 aa)    
Predicted Functional Partners:
GCA_000711725_02931
Unannotated protein.
  
 
  0.890
GCA_000711725_00368
Unannotated protein.
  
     0.774
GCA_000711725_00404
Unannotated protein.
  
     0.774
GCA_000711725_00610
Unannotated protein.
  
     0.774
GCA_000711725_02979
Unannotated protein.
  
     0.774
GCA_000711725_04858
Unannotated protein.
  
     0.757
GCA_000711725_04292
Unannotated protein.
  
     0.711
GCA_000711725_00212
Unannotated protein.
  
     0.705
GCA_000711725_02853
Unannotated protein.
  
     0.596
GCA_000711725_04984
Unannotated protein.
    
  0.508
Your Current Organism:
Roseomonas aerilata
NCBI taxonomy Id: 1123060
Other names: R. aerilata DSM 19363, Roseomonas aerilata DSM 19363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.