STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK60322.1Pimeloyl-ACP methyl ester carboxylesterase. (304 aa)    
Predicted Functional Partners:
SFK26015.1
Acyl transferase domain-containing protein.
  
 0.913
SFK44320.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 0.913
SFK88739.1
Acyl transferase domain-containing protein.
  
 0.913
SFK44292.1
Amino acid adenylation domain-containing protein.
   
 0.897
SFK44190.1
Alcohol dehydrogenase GroES-like domain-containing protein.
   
 0.870
SFK44219.1
Acyl transferase domain-containing protein.
   
 0.802
SFK60337.1
Hypothetical protein; Belongs to the UPF0178 family.
       0.773
SFK60349.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
       0.773
SFK60361.1
Putative hydroxymethylpyrimidine transport system permease protein.
       0.773
SFK60374.1
Putative hydroxymethylpyrimidine transport system ATP-binding protein.
       0.773
Your Current Organism:
Roseomonas stagni
NCBI taxonomy Id: 1123062
Other names: R. stagni DSM 19981, Roseomonas stagni DSM 19981, Roseomonas stagni HS-69, Roseomonas stagni JCM 15034
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