STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK72005.1Glycosyltransferase, GT2 family. (711 aa)    
Predicted Functional Partners:
SFK72019.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.889
SFK72032.1
Hypothetical protein.
 
  
 0.878
SFK71956.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.744
SFK20125.1
Glycosyltransferase, GT2 family.
 
     0.742
SFK68208.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.704
SFK71946.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.680
SFK15634.1
O-antigen biosynthesis protein WbqV.
  
 
 0.629
SFK71971.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.624
SFK58970.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.606
SFK94543.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.599
Your Current Organism:
Roseomonas stagni
NCBI taxonomy Id: 1123062
Other names: R. stagni DSM 19981, Roseomonas stagni DSM 19981, Roseomonas stagni HS-69, Roseomonas stagni JCM 15034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.