STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK71310.1Asp/Glu/hydantoin racemase. (242 aa)    
Predicted Functional Partners:
SFL03308.1
Allantoin racemase.
  
  
  0.832
SFK71323.1
5-hydroxyisourate hydrolase.
 
  
  0.828
SFK38598.1
Asp/Glu/hydantoin racemase.
  
  
 
0.779
SFK38473.1
Allantoinase.
 
  
  0.768
SFK40300.1
Allantoin racemase.
  
  
 
0.698
SFK78924.1
Asp/Glu/hydantoin racemase.
  
  
 
0.694
SFL00932.1
Asp/Glu/hydantoin racemase.
  
     0.657
SFL15503.1
Dihydropyrimidinase.
 
  
  0.620
SFK71297.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.615
SFL11430.1
Dihydropyrimidinase.
 
  
  0.611
Your Current Organism:
Roseomonas stagni
NCBI taxonomy Id: 1123062
Other names: R. stagni DSM 19981, Roseomonas stagni DSM 19981, Roseomonas stagni HS-69, Roseomonas stagni JCM 15034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.