STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL11626.1Cyclohexadienyl dehydratase. (265 aa)    
Predicted Functional Partners:
SFL11636.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 
 0.932
SFK98615.1
PAS domain S-box-containing protein.
   
 0.905
SFK52002.1
Polar amino acid transport system permease protein.
 
 0.850
SFL11541.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 
 0.848
SFK74881.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.846
SFL11515.1
Polar amino acid transport system permease protein.
 
 0.846
SFK74866.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.845
SFK15481.1
Signal transduction histidine kinase.
   
 0.837
SFK41084.1
Hpt domain-containing protein.
   
 0.837
SFL11418.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 
 0.835
Your Current Organism:
Roseomonas stagni
NCBI taxonomy Id: 1123062
Other names: R. stagni DSM 19981, Roseomonas stagni DSM 19981, Roseomonas stagni HS-69, Roseomonas stagni JCM 15034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.