STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87872.1Uncharacterized protein putative in bacteria. (284 aa)    
Predicted Functional Partners:
EPX84457.1
Uncharacterized protein putative in bacteria.
 
     0.637
EPX83100.1
Murein endopeptidase.
  
     0.549
EPX87118.1
Uncharacterized protein putative in bacteria.
 
     0.511
EPX87869.1
ABC-type transport system involved; In resistance to organic solvents, ATPase component.
       0.473
EPX87870.1
ABC-type transport system involved; In resistance to organic solvents, permease component.
       0.473
EPX87871.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.473
EPX85886.1
Putative ATPase.
  
     0.428
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.