STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87557.1Uncharacterized protein putative in bacteria; Overlaps another CDS with the same product name. (242 aa)    
Predicted Functional Partners:
EPX87554.1
N-terminal double-transmembrane domain protein.
 
     0.821
EPX87555.1
Putative protein (some members containing a von Willebrand factor type A (vWA) domain).
 
     0.781
EPX87558.1
Uncharacterized protein putative in bacteria; Overlaps another CDS with the same product name.
       0.773
EPX87552.1
Putative membrane protein.
 
     0.763
EPX87556.1
MoxR-like ATPase.
 
     0.725
EPX87559.1
Glutaredoxin/related protein.
       0.709
EPX87560.1
Methylamine utilization protein MauE.
       0.709
EPX87553.1
Hypothetical protein; (DUF4159.
 
     0.685
EPX84463.1
ADP-ribose pyrophosphatase.
      0.609
EPX87325.1
Hypothetical protein; Belongs to the UPF0260 family.
  
     0.513
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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