STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87572.1AAA domain protein. (371 aa)    
Predicted Functional Partners:
EPX87575.1
Flp pilus assembly protein CpaB.
 
  
 0.988
EPX87567.1
Flp pilus assembly protein TadC.
 
  
 0.984
EPX87568.1
Flp pilus assembly protein TadB.
 
  
 0.984
EPX87569.1
Hypothetical protein.
 
  
 0.983
EPX87574.1
Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.975
EPX87570.1
Flp pilus assembly protein, ATPase CpaF.
 
  
 0.970
EPX86514.1
TadE-like protein.
 
    0.949
EPX87577.1
Hypothetical protein.
 
  
 0.916
EPX87566.1
Flp pilus assembly protein, protease CpaA.
 
  
 0.909
EPX86513.1
Flp pilus assembly protein TadG.
 
    0.908
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.