STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87486.1Erythritol ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (356 aa)    
Predicted Functional Partners:
EPX87489.1
Erythritol-binding protein.
  0.988
EPX87785.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
  0.977
EPX87487.1
Erythritol ABC transporter ATP-binding protein.
  0.976
EPX84578.1
ABC-type sugar transport system, ATPase component.
 
  0.939
EPX86489.1
ABC-type sugar transport system, periplasmic component.
 
  0.929
EPX87348.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
  0.927
EPX87488.1
Putative periplasmic lipoprotein.
 
     0.917
EPX84647.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
  0.908
EPX87783.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; TC 3.A.1.2.-.
 
  0.873
EPX84847.1
ABC-type sugar transport system, ATPase component.
 
  0.851
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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