STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87130.1Cytochrome P450. (388 aa)    
Predicted Functional Partners:
EPX82375.1
Polyketide synthase module/related protein.
 
 0.997
EPX82374.1
Product; Related to short-chain alcohol dehydrogenase.
 
 0.996
EPX82373.1
Thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
 
 0.995
EPX83248.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1.
  
 0.988
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.971
EPX82370.1
Non-ribosomal peptide synthetase module/related protein.
 
 0.965
EPX82371.1
Non-ribosomal peptide synthetase module/related protein.
 
 0.964
EPX86500.1
Ferredoxin.
  
 0.952
EPX86270.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.921
EPX82791.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.921
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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