STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86074.1Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (517 aa)    
Predicted Functional Partners:
EPX86468.1
Putative cobalamin binding protein.
  
  0.829
EPX86060.1
Putative metal-binding protein.
 
     0.779
EPX86469.1
Hypothetical protein; (DUF1638.
 
     0.779
EPX83842.1
Virulence factor.
 
     0.779
EPX83844.1
Pterin binding enzyme.
 
     0.768
EPX83843.1
5,10-methylenetetrahydrofolate reductase.
 
    0.737
EPX86466.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain protein.
  
     0.669
EPX85929.1
Hypothetical protein.
  
     0.572
EPX87891.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
     0.437
EPX84262.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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