STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86159.1Protein related to penicillin acylase. (824 aa)    
Predicted Functional Partners:
EPX85883.1
Uncharacterized protein putative in bacteria; Overlaps another CDS with the same product name.
  
     0.665
EPX87901.1
Hypothetical protein.
  
     0.648
EPX86158.1
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase.
       0.632
EPX84712.1
Family description.
  
     0.604
EPX85776.1
Hypothetical protein; (DUF4115.
  
     0.598
EPX85884.1
Uncharacterized protein putative in bacteria; Overlaps another CDS with the same product name.
  
     0.567
EPX86109.1
Hypothetical protein.
  
     0.563
EPX87338.1
Hypothetical protein; (DUF1150.
  
     0.557
EPX82676.1
DNA polymerase III, delta subunit.
  
     0.530
EPX83172.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
Server load: low (10%) [HD]