STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86208.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
     0.837
EPX86210.1
Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
       0.749
EPX87464.1
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase component.
    
 0.712
EPX86211.1
Transcriptional regulator, TetR family.
       0.684
EPX86184.1
Acyl carrier protein.
  
 
   0.650
EPX82373.1
Thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
  
 0.641
EPX82374.1
Product; Related to short-chain alcohol dehydrogenase.
  
 0.641
EPX84712.1
Family description.
  
     0.621
EPX84516.1
ABC-type multidrug transport system, ATPase component.
    
  0.614
EPX84471.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
    
  0.614
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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