STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86385.1DNA polymerase III, alpha subunit; Overlaps another CDS with the same product name. (99 aa)    
Predicted Functional Partners:
EPX86384.1
DNA polymerase III, alpha subunit; Overlaps another CDS with the same product name.
     0.994
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.974
EPX82676.1
DNA polymerase III, delta subunit.
  
 0.974
dnaQ
DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
    
 0.972
EPX84278.1
DNA polymerase III, delta prime subunit.
    
 0.972
EPX86176.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
 0.969
EPX84450.1
DNA polymerase sliding clamp subunit (PCNA-like protein).
    
 0.954
EPX84451.1
DNA polymerase III, beta subunit.
    
 0.954
EPX85917.1
DNA polymerase III chi subunit, HolC.
    
 0.953
EPX85918.1
DNA polymerase III, chi subunit.
    
 0.953
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.