STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86399.1Formiminoglutamate deiminase. (410 aa)    
Predicted Functional Partners:
EPX86400.1
Transcriptional regulator, GntR family.
  
 0.968
EPX86397.1
Imidazolonepropionase and related amidohydrolase; overlaps another CDS with the same product name.
 
  
 0.949
EPX86398.1
Imidazolonepropionase and related amidohydrolase; overlaps another CDS with the same product name.
 
  
 0.949
hutH
Histidine ammonia-lyase.
 
  
 0.881
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.836
EPX86170.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.762
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.761
EPX83251.1
Dihydrouracil dehydrogenase (NAD+)/dihydropyrimidine dehydrogenase (NADP+).
  
 
 0.760
EPX86387.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
  
 
 0.756
EPX83825.1
Inosine-uridine nucleoside N-ribohydrolase.
    
 0.754
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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