STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86480.1Uncharacterized protein putative in bacteria. (161 aa)    
Predicted Functional Partners:
EPX86482.1
NADH:ubiquinone oxidoreductase 17.2 kD subunit.
 
     0.929
EPX86481.1
ABC-type transport system; Involved in resistance to organic solvents, periplasmic component.
       0.849
EPX87171.1
DnaJ-class molecular chaperone; Containing C-terminal Zn finger domain protein.
  
     0.632
EPX83840.1
Exopolyphosphatase; Overlaps another CDS with the same product name.
  
     0.606
EPX84427.1
Uncharacterized protein putative in bacteria.
  
     0.599
atpF
F0F1-type ATP synthase, subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.593
EPX84218.1
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.575
EPX85206.1
Hypothetical protein.
  
     0.561
EPX87134.1
Uncharacterized protein putative in bacteria.
  
     0.552
EPX86256.1
NusB antitermination factor.
  
     0.547
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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