STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86524.1Transcriptional regulator, XRE family. (86 aa)    
Predicted Functional Partners:
EPX86073.1
GMP synthase (glutamine-hydrolyzing); C-terminal domain or B subunit.
     
 0.791
EPX86527.1
Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name.
 
     0.770
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.764
EPX86525.1
Sulfate permease and related transporter (MFS superfamily).
 
     0.640
EPX86061.1
IMP dehydrogenase/GMP reductase.
    
 0.618
EPX84373.1
Hypothetical protein.
 
   
 0.544
EPX86526.1
Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name.
 
     0.529
EPX84900.1
Rhodanese-related sulfurtransferase.
     
 0.504
EPX85829.1
Haloacid Dehalogenase superfamily, subfamily IB.
 
  
 0.501
EPX82698.1
Sulfite reductase, beta subunit (hemoprotein).
     
 0.488
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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