Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPX84608.1 | EPX86184.1 | ruthe_01967 | ruthe_00993 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Acyl carrier protein. | 0.947 |
| EPX84608.1 | EPX86276.1 | ruthe_01967 | ruthe_01090 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.416 |
| EPX84608.1 | EPX86525.1 | ruthe_01967 | ruthe_01341 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Sulfate permease and related transporter (MFS superfamily). | 0.924 |
| EPX84608.1 | EPX86526.1 | ruthe_01967 | ruthe_01342 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.924 |
| EPX84608.1 | EPX86527.1 | ruthe_01967 | ruthe_01343 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.924 |
| EPX84608.1 | EPX86629.1 | ruthe_01967 | ruthe_01447 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | NADH dehydrogenase subunit M. | 0.999 |
| EPX84608.1 | acpP | ruthe_01967 | ruthe_00638 | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.948 |
| EPX86184.1 | EPX84608.1 | ruthe_00993 | ruthe_01967 | Acyl carrier protein. | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.947 |
| EPX86184.1 | EPX86525.1 | ruthe_00993 | ruthe_01341 | Acyl carrier protein. | Sulfate permease and related transporter (MFS superfamily). | 0.529 |
| EPX86184.1 | EPX86526.1 | ruthe_00993 | ruthe_01342 | Acyl carrier protein. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.529 |
| EPX86184.1 | EPX86527.1 | ruthe_00993 | ruthe_01343 | Acyl carrier protein. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.529 |
| EPX86184.1 | EPX86629.1 | ruthe_00993 | ruthe_01447 | Acyl carrier protein. | NADH dehydrogenase subunit M. | 0.986 |
| EPX86276.1 | EPX84608.1 | ruthe_01090 | ruthe_01967 | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.416 |
| EPX86276.1 | EPX86525.1 | ruthe_01090 | ruthe_01341 | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Sulfate permease and related transporter (MFS superfamily). | 0.718 |
| EPX86276.1 | EPX86526.1 | ruthe_01090 | ruthe_01342 | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.718 |
| EPX86276.1 | EPX86527.1 | ruthe_01090 | ruthe_01343 | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.718 |
| EPX86276.1 | gcvP | ruthe_01090 | ruthe_00793 | L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.848 |
| EPX86524.1 | EPX86525.1 | ruthe_01340 | ruthe_01341 | Transcriptional regulator, XRE family. | Sulfate permease and related transporter (MFS superfamily). | 0.640 |
| EPX86524.1 | EPX86526.1 | ruthe_01340 | ruthe_01342 | Transcriptional regulator, XRE family. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.529 |
| EPX86524.1 | EPX86527.1 | ruthe_01340 | ruthe_01343 | Transcriptional regulator, XRE family. | Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name. | 0.770 |
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