STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86619.1propionyl-CoA carboxylase carboxyltransferase subunit. (509 aa)    
Predicted Functional Partners:
EPX86478.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.999
EPX86615.1
Biotin carboxyl carrier protein/biotin carboxylase.
 0.999
EPX83310.1
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
 
 0.999
EPX86576.1
Pyruvate carboxylase; Overlaps another CDS with the same product name.
 
 0.971
EPX86575.1
Pyruvate carboxylase; Overlaps another CDS with the same product name.
 
 0.970
EPX83804.1
methylmalonyl-CoA epimerase.
 
 
 0.960
EPX87411.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.943
EPX82373.1
Thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
  
 0.895
EPX82374.1
Product; Related to short-chain alcohol dehydrogenase.
  
 0.895
EPX82375.1
Polyketide synthase module/related protein.
  
 
 0.882
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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