STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX86670.1Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-. (267 aa)    
Predicted Functional Partners:
EPX86666.1
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 0.989
EPX84260.1
ABC transporter ATP-binding protein.
 0.984
EPX86668.1
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.960
EPX86669.1
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
    
0.960
EPX86667.1
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
 0.940
EPX84558.1
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.873
EPX84259.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
 
0.813
EPX84258.1
Hypothetical protein.
 
 
 0.735
EPX84257.1
L-glutamine-binding protein.
 
 0.656
EPX86671.1
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
 
  
 0.622
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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