Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPX85961.1 | EPX85962.1 | ruthe_01535 | ruthe_01536 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Transcriptional regulator, ArsR family. | 0.986 |
| EPX85961.1 | EPX85963.1 | ruthe_01535 | ruthe_01537 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Oligoendopeptidase F. | 0.536 |
| EPX85961.1 | EPX87316.1 | ruthe_01535 | ruthe_00715 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.460 |
| EPX85962.1 | EPX85961.1 | ruthe_01536 | ruthe_01535 | Transcriptional regulator, ArsR family. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.986 |
| EPX85962.1 | EPX85963.1 | ruthe_01536 | ruthe_01537 | Transcriptional regulator, ArsR family. | Oligoendopeptidase F. | 0.536 |
| EPX85963.1 | EPX85961.1 | ruthe_01537 | ruthe_01535 | Oligoendopeptidase F. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.536 |
| EPX85963.1 | EPX85962.1 | ruthe_01537 | ruthe_01536 | Oligoendopeptidase F. | Transcriptional regulator, ArsR family. | 0.536 |
| EPX85963.1 | EPX85964.1 | ruthe_01537 | ruthe_01538 | Oligoendopeptidase F. | Oligoendopeptidase F. | 0.986 |
| EPX85963.1 | EPX86471.1 | ruthe_01537 | ruthe_01286 | Oligoendopeptidase F. | Hypothetical protein. | 0.505 |
| EPX85963.1 | EPX86673.1 | ruthe_01537 | ruthe_01491 | Oligoendopeptidase F. | Hypothetical protein. | 0.436 |
| EPX85963.1 | EPX87316.1 | ruthe_01537 | ruthe_00715 | Oligoendopeptidase F. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.410 |
| EPX85963.1 | secE | ruthe_01537 | ruthe_02686 | Oligoendopeptidase F. | Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.466 |
| EPX85964.1 | EPX85963.1 | ruthe_01538 | ruthe_01537 | Oligoendopeptidase F. | Oligoendopeptidase F. | 0.986 |
| EPX85964.1 | EPX86471.1 | ruthe_01538 | ruthe_01286 | Oligoendopeptidase F. | Hypothetical protein. | 0.505 |
| EPX85964.1 | EPX87316.1 | ruthe_01538 | ruthe_00715 | Oligoendopeptidase F. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.410 |
| EPX86471.1 | EPX85963.1 | ruthe_01286 | ruthe_01537 | Hypothetical protein. | Oligoendopeptidase F. | 0.505 |
| EPX86471.1 | EPX85964.1 | ruthe_01286 | ruthe_01538 | Hypothetical protein. | Oligoendopeptidase F. | 0.505 |
| EPX86673.1 | EPX85963.1 | ruthe_01491 | ruthe_01537 | Hypothetical protein. | Oligoendopeptidase F. | 0.436 |
| EPX86673.1 | secE | ruthe_01491 | ruthe_02686 | Hypothetical protein. | Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.455 |
| EPX87316.1 | EPX85961.1 | ruthe_00715 | ruthe_01535 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.460 |
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