STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX85472.1ABC-type dipeptide transport system, periplasmic component. (529 aa)    
Predicted Functional Partners:
EPX85471.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  0.986
EPX85470.1
Oligopeptide/dipeptide ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.978
EPX85469.1
Oligopeptide/dipeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
  0.887
EPX85473.1
Hypothetical protein.
 
     0.874
EPX85468.1
Transcriptional regulator, GntR family.
 
     0.868
EPX87653.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  0.671
EPX87654.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  0.637
EPX87850.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  0.620
EPX87849.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  0.617
EPX84681.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  0.616
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.