STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84823.1Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (183 aa)    
Predicted Functional Partners:
EPX84822.1
Hypothetical protein.
     0.994
hisD-2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.898
EPX82375.1
Polyketide synthase module/related protein.
  
 0.862
EPX84821.1
Transcriptional regulator, LacI family.
 
 
   0.842
EPX85080.1
Short-chain alcohol dehydrogenase of unknown specificity.
  
     0.760
EPX84593.1
Product; Related to short-chain alcohol dehydrogenase.
  
     0.750
EPX84529.1
Glutamate synthase domain 1.
     
 0.747
EPX84530.1
Glutamate synthase domain 2.
     
 0.747
EPX85079.1
Product; Related to short-chain alcohol dehydrogenase.
 
     0.744
EPX83085.1
Product; Related to short-chain alcohol dehydrogenase.
  
     0.730
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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