STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84839.1Sulfur dehydrogenase subunit SoxD. (442 aa)    
Predicted Functional Partners:
EPX84838.1
Sulfur dehydrogenase subunit SoxC.
 
 0.999
EPX84607.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
  
 0.996
EPX84609.1
Cytochrome c1.
 
 0.995
EPX87382.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.994
EPX86174.1
Cytochrome c, mono- and diheme variant.
   
 0.994
EPX85765.1
Cytochrome c, mono- and diheme variant.
   
 0.994
EPX84836.1
Hypothetical protein.
 
  
 0.994
EPX83141.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
   
 0.994
EPX82915.1
Cytochrome c, mono- and diheme variant.
   
 0.994
msrP
Sulfite oxidase/related enzyme; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R [...]
   
 0.994
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.