STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84845.1Sugar phosphate isomerase/epimerase. (302 aa)    
Predicted Functional Partners:
EPX84846.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
     0.813
EPX85484.1
Putative dehydrogenase/related protein.
  
 
  0.723
EPX84188.1
Putative dehydrogenase/related protein.
  
 
  0.648
EPX84668.1
Putative dehydrogenase/related protein.
  
 
  0.634
EPX87354.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
 
 0.632
EPX82786.1
Putative dehydrogenase/related protein.
  
 
  0.608
EPX83305.1
Putative dehydrogenase/related protein.
  
 
  0.600
EPX87722.1
Putative dehydrogenase/related protein.
  
 
  0.582
EPX85866.1
Putative dehydrogenase/related protein.
  
 
  0.515
EPX87353.1
5-dehydro-2-deoxygluconokinase.
  
 
 0.504
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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