Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPX83760.1 | EPX83761.1 | ruthe_02556 | ruthe_02557 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Sarcosine oxidase gamma subunit. | 0.999 |
| EPX83760.1 | EPX84529.1 | ruthe_02556 | ruthe_02144 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Glutamate synthase domain 1. | 0.938 |
| EPX83760.1 | EPX84530.1 | ruthe_02556 | ruthe_02145 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Glutamate synthase domain 2. | 0.938 |
| EPX83760.1 | EPX84630.1 | ruthe_02556 | ruthe_01989 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Glycine/D-amino acid oxidase (deaminating). | 0.985 |
| EPX83760.1 | EPX86507.1 | ruthe_02556 | ruthe_01322 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Hypothetical protein. | 0.992 |
| EPX83760.1 | EPX86508.1 | ruthe_02556 | ruthe_01323 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | 0.423 |
| EPX83760.1 | EPX87895.1 | ruthe_02556 | ruthe_00100 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Aminotransferase class-V. | 0.771 |
| EPX83760.1 | glyA | ruthe_02556 | ruthe_02896 | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.958 |
| EPX83761.1 | EPX83760.1 | ruthe_02557 | ruthe_02556 | Sarcosine oxidase gamma subunit. | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | 0.999 |
| EPX83761.1 | EPX84529.1 | ruthe_02557 | ruthe_02144 | Sarcosine oxidase gamma subunit. | Glutamate synthase domain 1. | 0.825 |
| EPX83761.1 | EPX84530.1 | ruthe_02557 | ruthe_02145 | Sarcosine oxidase gamma subunit. | Glutamate synthase domain 2. | 0.825 |
| EPX83761.1 | EPX84630.1 | ruthe_02557 | ruthe_01989 | Sarcosine oxidase gamma subunit. | Glycine/D-amino acid oxidase (deaminating). | 0.818 |
| EPX83761.1 | EPX86508.1 | ruthe_02557 | ruthe_01323 | Sarcosine oxidase gamma subunit. | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | 0.993 |
| EPX83761.1 | glyA | ruthe_02557 | ruthe_02896 | Sarcosine oxidase gamma subunit. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.847 |
| EPX84529.1 | EPX83760.1 | ruthe_02144 | ruthe_02556 | Glutamate synthase domain 1. | Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family. | 0.938 |
| EPX84529.1 | EPX83761.1 | ruthe_02144 | ruthe_02557 | Glutamate synthase domain 1. | Sarcosine oxidase gamma subunit. | 0.825 |
| EPX84529.1 | EPX84530.1 | ruthe_02144 | ruthe_02145 | Glutamate synthase domain 1. | Glutamate synthase domain 2. | 0.999 |
| EPX84529.1 | EPX84629.1 | ruthe_02144 | ruthe_01988 | Glutamate synthase domain 1. | NAD dependent epimerase/dehydratase family. | 0.726 |
| EPX84529.1 | EPX84630.1 | ruthe_02144 | ruthe_01989 | Glutamate synthase domain 1. | Glycine/D-amino acid oxidase (deaminating). | 0.777 |
| EPX84529.1 | EPX86507.1 | ruthe_02144 | ruthe_01322 | Glutamate synthase domain 1. | Hypothetical protein. | 0.825 |
page 1 of 4