STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84645.1Sterol desaturase. (343 aa)    
Predicted Functional Partners:
EPX86443.1
Phytoene/squalene synthetase.
  
 0.815
EPX84574.1
Hypothetical protein.
  
 0.815
EPX84646.1
Rieske [2Fe-2S] domain protein, MocE subfamily.
 
     0.808
EPX87553.1
Hypothetical protein; (DUF4159.
   
 0.770
EPX87554.1
N-terminal double-transmembrane domain protein.
   
 0.770
EPX84644.1
Ketopantoate hydroxymethyltransferase.
 
     0.764
EPX84643.1
ABC-type sugar transport system, periplasmic component.
 
     0.748
EPX87130.1
Cytochrome P450.
  
 0.707
EPX87345.1
Fatty acid desaturase.
 
 
 0.699
EPX85861.1
Fatty acid desaturase.
 
 
 0.699
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.